Radical Oxidation of Biomolecules
Chantal Houé Levin (Professor Emerita)
Methionine is one of the amino acids most susceptible to oxidation and therefore a target of reactive oxygen species (ROS) in proteins. The first step has been known for a long time [Archirel2016, Neschchadin2014] and leads to free radicals with 2 centers and 3 electrons characterized in pulse radiolysis and quantum chemistry, but the products formed other than methionine sulfoxide at the end of the process are not well understood. We have thus undertaken a thorough study of their characterization in model molecules containing the thioether function: small peptides in which methionine is linked to various residues and at various positions in the polypeptide chain (N-terminal, C-terminal, mid-chain) ) [Archirel2019, Gregori2017]. Characterization was performed by mass spectrometry coupled with infrared spectroscopy (CLIO). Quantum chemistry calculations allowed us to propose mechanisms and geometries for these products [Bergès2020]. We have thus identified previously unknown products, including double bonds, cycles, etc. [Jiang2022, Jiang2023]. More recently, we turned to the oxidation of DNA bases, both purines and pyrimidines [Ma2018], and showed that HO° radicals led only to hydroxylation [Jiang2023]. Finally, regarding protein oxidation, we use gamma radiolysis to test the stability properties of various proteins (ancestral and resurrected proteins) with respect to heat and ionizing radiation [Halgand2020].
Some examples of free radicals in the Gly Met peptide possessing a 2-center and 3-electron bond. 1 SN bond; 2 SO bond; 3 SS bond in the dipeptide MetMet.
Collaborations
Pierre Archirel and Carine Clavaguera (TheoSim, ICP, Orsay), Debora Scuderi (CAPRI, ICP, Orsay), Pedro de Oliveira (TEMiC, ICP, Orsay), Krzysztof Bobrowski and Tomasz Szreder (ICHTJ, Warsaw, Poland).